Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: JELLYFISH
Upstream-Contact: Guillaume Marçais <gmarcais@umd.edu>
Source: http://www.cbcb.umd.edu/software/jellyfish/

Files: *
Copyright: Copyright 2011-2014 Guillaume Marçais1, Carl Kingsford
License: GPL-3+ or BSD-3-clause

Files: jellyfish/randomc.h
Copyright: Copyright 2008 Agner Fog
License: GPL
 See `/usr/share/common-licenses/GPL'.

Files: lib/jsoncpp.cpp include/jellyfish/json.h
Copyright: 2007-2010 Baptiste Lepilleur
License: MIT
 The author (Baptiste Lepilleur) explicitly disclaims copyright in all
 jurisdictions which recognize such a disclaimer. In such jurisdictions,
 this software is released into the Public Domain.
 .
 In jurisdictions which do not recognize Public Domain property (e.g. Germany as of
 2010), this software is Copyright (c) 2007-2010 by Baptiste Lepilleur, and is
 released under the terms of the MIT License (see below).
 .
 In jurisdictions which recognize Public Domain property, the user of this
 software may choose to accept it either as 1) Public Domain, 2) under the
 conditions of the MIT License (see below), or 3) under the terms of dual
 Public Domain/MIT License conditions described here, as they choose.
 .
 The MIT License is about as close to Public Domain as a license can get, and is
 described in clear, concise terms at:
 .
    http://en.wikipedia.org/wiki/MIT_License
 .
 The full text of the MIT License follows:
 .
 ========================================================================
 Copyright (c) 2007-2010 Baptiste Lepilleur
 .
 Permission is hereby granted, free of charge, to any person
 obtaining a copy of this software and associated documentation
 files (the "Software"), to deal in the Software without
 restriction, including without limitation the rights to use, copy,
 modify, merge, publish, distribute, sublicense, and/or sell copies
 of the Software, and to permit persons to whom the Software is
 furnished to do so, subject to the following conditions:
 .
 The above copyright notice and this permission notice shall be
 included in all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
 EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
 NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
 BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
 ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
 CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 SOFTWARE.
 ========================================================================
 (END LICENSE TEXT)
 .
 The MIT license is compatible with both the GPL and commercial
 software, affording one all of the rights of Public Domain with the
 minor nuisance of being required to keep the above copyright notice
 and license text in the source code. Note also that by accepting the
 Public Domain "license" you can re-license your copy using whatever
 license you like.

Files: unit_tests/gtest/src/gtest_main.cc
       unit_tests/gtest/src/gtest-all.cc
       unit_tests/gtest/gtest.h
Copyright: 2005-2008 Google Inc.
License: BSD-3-clause

License: BSD-3-clause
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions are
 met:
 .
     * Redistributions of source code must retain the above copyright
 notice, this list of conditions and the following disclaimer.
     * Redistributions in binary form must reproduce the above
 copyright notice, this list of conditions and the following disclaimer
 in the documentation and/or other materials provided with the
 distribution.
     * Neither the name of Google Inc. nor the names of its
 contributors may be used to endorse or promote products derived from
 this software without specific prior written permission.
 .
 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
 "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
 LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
 A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
 OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
 SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
 LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
 DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
 THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
 (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Files: m4/m4-ax_perl_ext.m4 m4/m4-ax_ruby_ext.m4
Copyright: Copyright (c) 2011 Stanislav Sedov <stas@FreeBSD.org>
           Copyright (c) 2014 Thomas Klausner <tk@giga.or.at>
License: 2clause
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions are
 met:
 .
 1. Redistributions of source code must retain the above copyright
 notice, this list of conditions and the following disclaimer.
 .
 2. Redistributions in binary form must reproduce the above copyright
 notice, this list of conditions and the following disclaimer in the
 documentation and/or other materials provided with the distribution.
 .
 THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
 PURPOSE ARE DISCLAIMED.  IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE
 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
 SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
 INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
 CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
 ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF
 THE POSSIBILITY OF SUCH DAMAGE.

Files: debian/*
Copyright: 2012-2014 Andreas Tille <tille@debian.org>
License: GPL-3+

License: GPL-3+
 See `/usr/share/common-licenses/GPL-3'.
